IL_8RXH_145

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

GAAGAAUAGGAAAU*AC

Length

16 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|L2|G|1198
8RXH|1|L2|A|1199
8RXH|1|L2|A|1200
8RXH|1|L2|G|1201
8RXH|1|L2|A|1202
8RXH|1|L2|A|1203
8RXH|1|L2|U|1204
8RXH|1|L2|A|1205
8RXH|1|L2|G|1206
8RXH|1|L2|G|1207
8RXH|1|L2|A|1208
8RXH|1|L2|A|1209
8RXH|1|L2|A|1210
8RXH|1|L2|U|1211
*
8RXH|1|L2|A|1225
8RXH|1|L2|C|1226

Current chains

Chain L2

LSUb_rRNA_chain_2

Nearby chains

Chain L1

Large subunit ribosomal RNA; LSU rRNA

Chain LI

Putative 60S ribosomal protein L13

Chain LL

Putative 60S ribosomal protein L27A/L29

Chain LP

60S ribosomal protein L18

Chain Lp

Putative 60S ribosomal protein L44