3D structure

PDB id
8RXH (explore in PDB, NAKB, or RNA 3D Hub)
Description
CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
Experimental method
ELECTRON MICROSCOPY
Resolution
2.93 Å

Loop

Sequence
CUA*UAAGG
Length
8 nucleotides
Bulged bases
8RXH|1|L2|A|1349
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8RXH|1|L2|C|1328
8RXH|1|L2|U|1329
8RXH|1|L2|A|1330
*
8RXH|1|L2|U|1347
8RXH|1|L2|A|1348
8RXH|1|L2|A|1349
8RXH|1|L2|G|1350
8RXH|1|L2|G|1351

Current chains

Chain L2
LSUb_rRNA_chain_2

Nearby chains

Chain L1
Large subunit ribosomal RNA; LSU rRNA
Chain L4
Large subunit ribosomal RNA; LSU rRNA
Chain LB
Putative ribosomal protein L3
Chain LE
Putative 60S ribosomal protein L9
Chain LH
Putative 60S ribosomal protein L13a
Chain Lm
Ubiquitin-60S ribosomal protein L40

Coloring options:

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