IL_8RXH_188
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CG*CGCCAAGUAUAUUCAUGAUCACAAG
- Length
- 27 nucleotides
- Bulged bases
- 8RXH|1|L6|C|49, 8RXH|1|L6|A|51, 8RXH|1|L6|A|60, 8RXH|1|L6|U|64, 8RXH|1|L6|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RXH|1|L6|C|10
8RXH|1|L6|G|11
*
8RXH|1|L6|C|46
8RXH|1|L6|G|47
8RXH|1|L6|C|48
8RXH|1|L6|C|49
8RXH|1|L6|A|50
8RXH|1|L6|A|51
8RXH|1|L6|G|52
8RXH|1|L6|U|53
8RXH|1|L6|A|54
8RXH|1|L6|U|55
8RXH|1|L6|A|56
8RXH|1|L6|U|57
8RXH|1|L6|U|58
8RXH|1|L6|C|59
8RXH|1|L6|A|60
8RXH|1|L6|U|61
8RXH|1|L6|G|62
8RXH|1|L6|A|63
8RXH|1|L6|U|64
8RXH|1|L6|C|65
8RXH|1|L6|A|66
8RXH|1|L6|C|67
8RXH|1|L6|A|68
8RXH|1|L6|A|69
8RXH|1|L6|G|70
Current chains
- Chain L6
- SR6_chain_6
Nearby chains
- Chain L1
- Large subunit ribosomal RNA; LSU rRNA
- Chain LF
- Putative 60S ribosomal protein L6
- Chain LH
- Putative 60S ribosomal protein L13a
- Chain LK
- Putative 40S ribosomal protein L14
- Chain LR
- 60S ribosomal protein L18a
- Chain Lg
- Putative ribosomal protein l35a
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