IL_8RXH_190

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

GAGAAG*UCAUCC

Length

12 nucleotides

Bulged bases

8RXH|1|L7|A|124

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|L7|G|121
8RXH|1|L7|A|122
8RXH|1|L7|G|123
8RXH|1|L7|A|124
8RXH|1|L7|A|125
8RXH|1|L7|G|126
*
8RXH|1|L7|U|137
8RXH|1|L7|C|138
8RXH|1|L7|A|139
8RXH|1|L7|U|140
8RXH|1|L7|C|141
8RXH|1|L7|C|142

Current chains

Chain L7

5.8S_rRNA_chain_7

Nearby chains

Chain L1

Large subunit ribosomal RNA; LSU rRNA

Chain L2

Large subunit ribosomal RNA; LSU rRNA

Chain LV

Putative 60S ribosomal protein L23a