IL_8RXH_191

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CUC*GUG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8RXH_191 not in the Motif Atlas

Geometric match to IL_5TBW_034

Geometric discrepancy: 0.1472

The information below is about IL_5TBW_034

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

8RXH|1|L7|C|127
8RXH|1|L7|U|128
8RXH|1|L7|C|129
*
8RXH|1|L7|G|134
8RXH|1|L7|U|135
8RXH|1|L7|G|136

Current chains

Chain L7

5.8S_rRNA_chain_7

Nearby chains

Chain L1

Large subunit ribosomal RNA; LSU rRNA

Chain LV

Putative 60S ribosomal protein L23a