IL_8RXH_203
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GACUUAG*CGC
- Length
- 10 nucleotides
- Bulged bases
- 8RXH|1|S1|A|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8RXH_203 not in the Motif Atlas
- Homologous match to IL_8C3A_395
- Geometric discrepancy: 0.1017
- The information below is about IL_8C3A_395
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80458.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
8RXH|1|S1|G|42
8RXH|1|S1|A|43
8RXH|1|S1|C|44
8RXH|1|S1|U|45
8RXH|1|S1|U|46
8RXH|1|S1|A|47
8RXH|1|S1|G|48
*
8RXH|1|S1|C|474
8RXH|1|S1|G|475
8RXH|1|S1|C|476
Current chains
- Chain S1
- SSU_rRNA_chain_S1
Nearby chains
- Chain SD
- Putative 40S ribosomal protein S9
- Chain SK
- 40S ribosomal protein S8
- Chain SP
- Putative 40S ribosomal protein S23
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