IL_8RXH_230

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

GGGCUGUGCAG*CCCUUGCAGC

Length

21 nucleotides

Bulged bases

8RXH|1|S1|C|698

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|S1|G|690
8RXH|1|S1|G|691
8RXH|1|S1|G|692
8RXH|1|S1|C|693
8RXH|1|S1|U|694
8RXH|1|S1|G|695
8RXH|1|S1|U|696
8RXH|1|S1|G|697
8RXH|1|S1|C|698
8RXH|1|S1|A|699
8RXH|1|S1|G|700
*
8RXH|1|S1|C|746
8RXH|1|S1|C|747
8RXH|1|S1|C|748
8RXH|1|S1|U|749
8RXH|1|S1|U|750
8RXH|1|S1|G|751
8RXH|1|S1|C|752
8RXH|1|S1|A|753
8RXH|1|S1|G|754
8RXH|1|S1|C|755

Current chains

Chain S1

SSU_rRNA_chain_S1

Nearby chains

Chain SI

40S ribosomal protein S7

Chain SJ

Putative 40S ribosomal protein S15A