IL_8RXH_233

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

AGCG*CAGUCAUUUGACUUGAAU

Length

22 nucleotides

Bulged bases

8RXH|1|S1|U|886

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|S1|A|861
8RXH|1|S1|G|862
8RXH|1|S1|C|863
8RXH|1|S1|G|864
*
8RXH|1|S1|C|874
8RXH|1|S1|A|875
8RXH|1|S1|G|876
8RXH|1|S1|U|877
8RXH|1|S1|C|878
8RXH|1|S1|A|879
8RXH|1|S1|U|880
8RXH|1|S1|U|881
8RXH|1|S1|U|882
8RXH|1|S1|G|883
8RXH|1|S1|A|884
8RXH|1|S1|C|885
8RXH|1|S1|U|886
8RXH|1|S1|U|887
8RXH|1|S1|G|888
8RXH|1|S1|A|889
8RXH|1|S1|A|890
8RXH|1|S1|U|891

Current chains

Chain S1

SSU_rRNA_chain_S1

Nearby chains

Chain SD

Putative 40S ribosomal protein S9

Chain SE

40S ribosomal protein S4

Chain SZ

40S ribosomal protein S24