IL_8RXH_235

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

UAC*GCUUUUGUUGUUUUUAAAG

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|S1|U|929
8RXH|1|S1|A|930
8RXH|1|S1|C|931
*
8RXH|1|S1|G|939
8RXH|1|S1|C|940
8RXH|1|S1|U|941
8RXH|1|S1|U|942
8RXH|1|S1|U|943
8RXH|1|S1|U|944
8RXH|1|S1|G|945
8RXH|1|S1|U|946
8RXH|1|S1|U|947
8RXH|1|S1|G|948
8RXH|1|S1|U|949
8RXH|1|S1|U|950
8RXH|1|S1|U|951
8RXH|1|S1|U|952
8RXH|1|S1|U|953
8RXH|1|S1|A|954
8RXH|1|S1|A|955
8RXH|1|S1|A|956
8RXH|1|S1|G|957

Current chains

Chain S1

SSU_rRNA_chain_S1

Nearby chains

Chain SG

40S ribosomal protein S6

Chain SK

40S ribosomal protein S8

Chain SU

Ribosomal protein S17 family protein

Chain Sh

Putative RNA binding protein