IL_8RXH_261

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

GAUGAGA*UUCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|S1|G|1575
8RXH|1|S1|A|1576
8RXH|1|S1|U|1577
8RXH|1|S1|G|1578
8RXH|1|S1|A|1579
8RXH|1|S1|G|1581
8RXH|1|S1|A|1582
*
8RXH|1|S1|U|1609
8RXH|1|S1|U|1610
8RXH|1|S1|C|1611
8RXH|1|S1|C|1612

Current chains

Chain S1

SSU_rRNA_chain_S1

Nearby chains

Chain SN

Putative 40S ribosomal protein S10

Chain SQ

40S ribosomal protein S12

Chain Sf

Ubiquitin-60S ribosomal protein L40