IL_8RXH_270

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CCCAGUA*UUCUCUG

Length

14 nucleotides

Bulged bases

8RXH|1|S1|G|1697, 8RXH|1|S1|U|1698

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|S1|C|1693
8RXH|1|S1|C|1694
8RXH|1|S1|C|1695
8RXH|1|S1|A|1696
8RXH|1|S1|G|1697
8RXH|1|S1|U|1698
8RXH|1|S1|A|1699
*
8RXH|1|S1|U|1776
8RXH|1|S1|U|1777
8RXH|1|S1|C|1778
8RXH|1|S1|U|1779
8RXH|1|S1|C|1780
8RXH|1|S1|U|1781
8RXH|1|S1|G|1782

Current chains

Chain S1

SSU_rRNA_chain_S1

Nearby chains

Chain SC

Putative 40S ribosomal protein S3

Chain SL

Putative 40S ribosomal protein S16

Chain SM

Putative ribosomal protein S20

Chain Sg

Guanine nucleotide-binding protein subunit beta-like protein