IL_8RXH_296

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CGAAU*AGUUGUG

Length

12 nucleotides

Bulged bases

8RXH|1|L1|U|146

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8RXH|1|L1|C|119
8RXH|1|L1|G|120
8RXH|1|L1|A|121
8RXH|1|L1|A|122
8RXH|1|L1|U|123
*
8RXH|1|L1|A|143
8RXH|1|L1|G|144
8RXH|1|L1|U|145
8RXH|1|L1|U|146
8RXH|1|L1|G|147
8RXH|1|L1|U|148
8RXH|1|L1|G|149

Current chains

Chain L1

LSUa_rRNA_chain_1

Nearby chains

Chain L7

5.8S ribosomal RNA; 5.8S rRNA

Chain LG

60S ribosomal protein L7a

Chain LM

Ribosomal protein L15

Chain La

Putative 60S ribosomal protein L35