IL_8RXH_331
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- GAGAACAAG*CCCCGGAAUC
- Length
- 19 nucleotides
- Bulged bases
- 8RXH|1|S1|C|1938, 8RXH|1|S1|G|1940
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8RXH|1|S1|G|1881
8RXH|1|S1|A|1882
8RXH|1|S1|G|1883
8RXH|1|S1|A|1884
8RXH|1|S1|A|1885
8RXH|1|S1|C|1886
8RXH|1|S1|A|1887
8RXH|1|S1|A|1888
8RXH|1|S1|G|1889
*
8RXH|1|S1|C|1935
8RXH|1|S1|C|1936
8RXH|1|S1|C|1937
8RXH|1|S1|C|1938
8RXH|1|S1|G|1939
8RXH|1|S1|G|1940
8RXH|1|S1|A|1941
8RXH|1|S1|A|1942
8RXH|1|S1|U|1943
8RXH|1|S1|C|1944
Current chains
- Chain S1
- SSU_rRNA_chain_S1
Nearby chains
- Chain SC
- Putative 40S ribosomal protein S3
- Chain SH
- 40S ribosomal protein S5
- Chain SL
- Putative 40S ribosomal protein S16
- Chain SM
- Putative ribosomal protein S20
- Chain SS
- Putative ribosomal protein S29
- Chain SX
- 40S ribosomal protein S19-like protein
Coloring options: