IL_8SCB_218

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

GAG*CGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8SCB_218 not in the Motif Atlas

Geometric match to IL_4ZC7_002

Geometric discrepancy: 0.3398

The information below is about IL_4ZC7_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_43275.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

30

Unit IDs

8SCB|1|9|G|692
8SCB|1|9|A|693
8SCB|1|9|G|694
*
8SCB|1|9|C|736
8SCB|1|9|G|737
8SCB|1|9|C|738

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain HH

eS7

Chain WW

uS8