IL_8SCB_226

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UUC*GAA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: UUC,GAA

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8SCB_226 not in the Motif Atlas

Homologous match to IL_8C3A_435

Geometric discrepancy: 0.4087

The information below is about IL_8C3A_435

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

8SCB|1|9|U|882
8SCB|1|9|U|883
8SCB|1|9|C|884
*
8SCB|1|9|G|902
8SCB|1|9|A|903
8SCB|1|9|A|904

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain LL

uS17

Chain R

Ribosomal protein L19