IL_8SCB_319

3D structure

PDB id

8SCB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Terminating ribosome with SRI-41315

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

AC*GAA(PSU)

Length

6 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8SCB_319 not in the Motif Atlas

Homologous match to IL_8P9A_412

Geometric discrepancy: 0.3556

The information below is about IL_8P9A_412

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68140.4

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

18

Unit IDs

8SCB|1|9|A|802
8SCB|1|9|C|803
*
8SCB|1|9|G|860
8SCB|1|9|A|861
8SCB|1|9|A|862
8SCB|1|9|PSU|863

Current chains

Chain 9

18S_rRNA

Nearby chains

Chain HH

eS7

Chain LL

uS17

Chain WW

uS8

Chain XX

uS12