IL_8SUP_048

3D structure

PDB id

8SUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 48S translation initiation complex assembled on the encephalomyocarditis virus IRES

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUAG*CUUGGACC

Length

13 nucleotides

Bulged bases

8SUP|1|2|G|970

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8SUP|1|2|G|952
8SUP|1|2|C|953
8SUP|1|2|U|954
8SUP|1|2|A|955
8SUP|1|2|G|956
*
8SUP|1|2|C|967
8SUP|1|2|U|968
8SUP|1|2|U|969
8SUP|1|2|G|970
8SUP|1|2|G|971
8SUP|1|2|A|972
8SUP|1|2|C|973
8SUP|1|2|C|974

Current chains

Chain 2

18S rRNA

Nearby chains

Chain C

eS1

Chain P

Small ribosomal subunit protein uS11

Chain j

Eukaryotic translation initiation factor 2 subunit 1