IL_8T2Z_033
3D structure
- PDB id
- 8T2Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8T2Z|1|A1|G|908, 8T2Z|1|A1|A|920, 8T2Z|1|A1|A|921, 8T2Z|1|A1|U|922
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T2Z_033 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.0519
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8T2Z|1|A1|G|907
8T2Z|1|A1|G|908
8T2Z|1|A1|G|909
*
8T2Z|1|A1|U|919
8T2Z|1|A1|A|920
8T2Z|1|A1|A|921
8T2Z|1|A1|U|922
8T2Z|1|A1|C|923
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AA
- 60S ribosomal protein L2-A
- Chain AN
- 60S ribosomal protein L15-A
- Chain AP
- 60S ribosomal protein L17-A
- Chain Aj
- 60S ribosomal protein L37-A
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