IL_8T2Z_061
3D structure
- PDB id
- 8T2Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- UCAAC*GGA
- Length
- 8 nucleotides
- Bulged bases
- 8T2Z|1|A1|G|1514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T2Z_061 not in the Motif Atlas
- Homologous match to IL_8P9A_290
- Geometric discrepancy: 0.0931
- The information below is about IL_8P9A_290
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
8T2Z|1|A1|U|1501
8T2Z|1|A1|C|1502
8T2Z|1|A1|A|1503
8T2Z|1|A1|A|1504
8T2Z|1|A1|C|1505
*
8T2Z|1|A1|G|1513
8T2Z|1|A1|G|1514
8T2Z|1|A1|A|1515
Current chains
- Chain A1
- 25S rRNA
Nearby chains
- Chain AP
- 60S ribosomal protein L17-A
- Chain AR
- 60S ribosomal protein L19-A
- Chain Al
- 60S ribosomal protein L39
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