IL_8T2Z_188

3D structure

PDB id

8T2Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA, messenger RNA, POST

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUGUCAG*CUUGGAUUUA

Length

17 nucleotides

Bulged bases

8T2Z|1|B5|G|913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T2Z|1|B5|U|893
8T2Z|1|B5|U|894
8T2Z|1|B5|G|895
8T2Z|1|B5|U|896
8T2Z|1|B5|C|897
8T2Z|1|B5|A|898
8T2Z|1|B5|G|899
*
8T2Z|1|B5|C|910
8T2Z|1|B5|U|911
8T2Z|1|B5|U|912
8T2Z|1|B5|G|913
8T2Z|1|B5|G|914
8T2Z|1|B5|A|915
8T2Z|1|B5|U|916
8T2Z|1|B5|U|917
8T2Z|1|B5|U|918
8T2Z|1|B5|A|919

Current chains

Chain B5

18S rRNA

Nearby chains

Chain A1

Large subunit ribosomal RNA; LSU rRNA

Chain BB

RPS1A isoform 1

Chain BO

40S ribosomal protein S14-A