IL_8T30_065

3D structure

PDB id

8T30 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypomethylated yeast 80S bound with cycloheximide, unmodified U2921, mid rotated

Experimental method

ELECTRON MICROSCOPY

Resolution

2.88 Å

Loop

Sequence

AUUCUUC*GGAAUAGUU

Length

16 nucleotides

Bulged bases

8T30|1|A1|U|1629, 8T30|1|A1|U|1815, 8T30|1|A1|A|1816

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T30|1|A1|A|1625
8T30|1|A1|U|1626
8T30|1|A1|U|1627
8T30|1|A1|C|1628
8T30|1|A1|U|1629
8T30|1|A1|U|1630
8T30|1|A1|C|1631
*
8T30|1|A1|G|1811
8T30|1|A1|G|1812
8T30|1|A1|A|1813
8T30|1|A1|A|1814
8T30|1|A1|U|1815
8T30|1|A1|A|1816
8T30|1|A1|G|1817
8T30|1|A1|U|1818
8T30|1|A1|U|1819

Current chains

Chain A1

25S rRNA

Nearby chains

Chain AZ

60S ribosomal protein L27-A