IL_8T3B_200
3D structure
- PDB id
- 8T3B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- ACCAC*GUCCCU
- Length
- 11 nucleotides
- Bulged bases
- 8T3B|1|B5|C|1158, 8T3B|1|B5|C|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T3B|1|B5|A|1157
8T3B|1|B5|C|1158
8T3B|1|B5|C|1159
8T3B|1|B5|A|1160
8T3B|1|B5|C|1161
*
8T3B|1|B5|G|1616
8T3B|1|B5|U|1617
8T3B|1|B5|C|1618
8T3B|1|B5|C|1619
8T3B|1|B5|C|1620
8T3B|1|B5|U|1621
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BF
- Rps5p
- Chain BQ
- 40S ribosomal protein S16-A
- Chain BU
- RPS20 isoform 1
- Chain Ba
- RPS26B isoform 1
- Chain Bc
- RPS28A isoform 1
Coloring options: