IL_8T3C_055

3D structure

PDB id

8T3C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II

Experimental method

ELECTRON MICROSCOPY

Resolution

3.86 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

8T3C|1|A1|A|1263, 8T3C|1|A1|G|1264

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8T3C|1|A1|G|1262
8T3C|1|A1|A|1263
8T3C|1|A1|G|1264
8T3C|1|A1|U|1265
8T3C|1|A1|G|1266
*
8T3C|1|A1|C|1275
8T3C|1|A1|U|1276
8T3C|1|A1|C|1277

Current chains

Chain A1

25S rRNA

Nearby chains

Chain Am

Ubiquitin-60S ribosomal protein L40