IL_8T3C_184
3D structure
- PDB id
- 8T3C (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Hypomethylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome entry site (IRES), eEF2, GDP, and sordarin, Structure II
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.86 Å
Loop
- Sequence
- UACU*GGAAUA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T3C|1|B5|U|745
8T3C|1|B5|A|746
8T3C|1|B5|C|747
8T3C|1|B5|U|748
*
8T3C|1|B5|G|801
8T3C|1|B5|G|802
8T3C|1|B5|A|803
8T3C|1|B5|A|804
8T3C|1|B5|U|805
8T3C|1|B5|A|806
Current chains
- Chain B5
- 18S rRNA
Nearby chains
- Chain BE
- 40S ribosomal protein S4-A
- Chain BH
- 40S ribosomal protein S7-A
- Chain BL
- 40S ribosomal protein S11-A
- Chain BW
- RPS22A isoform 1
- Chain BX
- 40S ribosomal protein S23-A
Coloring options: