IL_8T5H_034
3D structure
- PDB id
- 8T5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- UUU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T5H_034 not in the Motif Atlas
- Homologous match to IL_4WF9_034
- Geometric discrepancy: 0.236
- The information below is about IL_4WF9_034
- Detailed Annotation
- Isolated cWS basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_52767.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 28
Unit IDs
8T5H|1|B|U|870
8T5H|1|B|U|871
8T5H|1|B|U|872
*
8T5H|1|B|A|905
8T5H|1|B|U|906
8T5H|1|B|G|907
Current chains
- Chain B
- 23S
Nearby chains
- Chain M
- 50S ribosomal protein L16
Coloring options: