IL_8T5H_141
3D structure
- PDB id
- 8T5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CGUAAAG*CG
- Length
- 9 nucleotides
- Bulged bases
- 8T5H|1|v|A|572
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8T5H_141 not in the Motif Atlas
- Homologous match to IL_5J7L_026
- Geometric discrepancy: 0.1153
- The information below is about IL_5J7L_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.6
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 4
Unit IDs
8T5H|1|v|C|569
8T5H|1|v|G|570
8T5H|1|v|U|571
8T5H|1|v|A|572
8T5H|1|v|A|573
8T5H|1|v|A|574
8T5H|1|v|G|575
*
8T5H|1|v|C|880
8T5H|1|v|G|881
Current chains
- Chain v
- 16S
Nearby chains
- Chain k
- 30S ribosomal protein S12
- Chain p
- 30S ribosomal protein S17
Coloring options: