IL_8T5H_163
3D structure
- PDB id
- 8T5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GAAG*UGUGCCUUCGGGAAC
- Length
- 19 nucleotides
- Bulged bases
- 8T5H|1|v|U|1030, 8T5H|1|v|C|1031, 8T5H|1|v|G|1032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8T5H|1|v|G|1003
8T5H|1|v|A|1004
8T5H|1|v|A|1005
8T5H|1|v|G|1006
*
8T5H|1|v|U|1023
8T5H|1|v|G|1024
8T5H|1|v|U|1025
8T5H|1|v|G|1026
8T5H|1|v|C|1027
8T5H|1|v|C|1028
8T5H|1|v|U|1029
8T5H|1|v|U|1030
8T5H|1|v|C|1031
8T5H|1|v|G|1032
8T5H|1|v|G|1033
8T5H|1|v|G|1034
8T5H|1|v|A|1035
8T5H|1|v|A|1036
8T5H|1|v|C|1037
Current chains
- Chain v
- 16S
Nearby chains
No other chains within 10ÅColoring options: