3D structure

PDB id
8T5H (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
Experimental method
ELECTRON MICROSCOPY
Resolution
3.3 Å

Loop

Sequence
GUUGCCAGC*GGGAACUC
Length
17 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8T5H|1|v|G|1124
8T5H|1|v|U|1125
8T5H|1|v|U|1126
8T5H|1|v|G|1127
8T5H|1|v|C|1128
8T5H|1|v|C|1129
8T5H|1|v|A|1130
8T5H|1|v|G|1131
8T5H|1|v|C|1132
*
8T5H|1|v|G|1142
8T5H|1|v|G|1143
8T5H|1|v|G|1144
8T5H|1|v|A|1145
8T5H|1|v|A|1146
8T5H|1|v|C|1147
8T5H|1|v|U|1148
8T5H|1|v|C|1149

Current chains

Chain v
16S

Nearby chains

Chain h
30S ribosomal protein S9
Chain i
30S ribosomal protein S10

Coloring options:

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