IL_8UD6_064
3D structure
- PDB id
- 8UD6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- ACUCUG*CUGU
- Length
- 10 nucleotides
- Bulged bases
- 8UD6|1|1A|G|1992
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UD6_064 not in the Motif Atlas
- Homologous match to IL_7RQB_067
- Geometric discrepancy: 0.0459
- The information below is about IL_7RQB_067
- Detailed Annotation
- Intercalated tWH
- Broad Annotation
- Intercalated tWH
- Motif group
- IL_76273.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 14
Unit IDs
8UD6|1|1A|A|1669
8UD6|1|1A|C|1670
8UD6|1|1A|U|1671
8UD6|1|1A|C|1672
8UD6|1|1A|U|1673
8UD6|1|1A|G|1674
*
8UD6|1|1A|C|1990
8UD6|1|1A|U|1991
8UD6|1|1A|G|1992
8UD6|1|1A|U|1993
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 1E
- 50S ribosomal protein L3
- Chain 1O
- 50S ribosomal protein L14
Coloring options: