IL_8UD6_185
3D structure
- PDB id
- 8UD6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 8UD6|1|2A|G|352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UD6_185 not in the Motif Atlas
- Homologous match to IL_7RQB_012
- Geometric discrepancy: 0.0959
- The information below is about IL_7RQB_012
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_38958.7
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
8UD6|1|2A|C|288
8UD6|1|2A|A|289
8UD6|1|2A|G|290
*
8UD6|1|2A|U|350
8UD6|1|2A|G|351
8UD6|1|2A|G|352
8UD6|1|2A|G|353
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: