IL_8UD6_222
3D structure
- PDB id
- 8UD6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.7 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 8UD6|1|2A|A|1379
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UD6_222 not in the Motif Atlas
- Homologous match to IL_7RQB_052
- Geometric discrepancy: 0.0395
- The information below is about IL_7RQB_052
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
8UD6|1|2A|C|1351
8UD6|1|2A|U|1352
8UD6|1|2A|A|1353
8UD6|1|2A|A|1354
8UD6|1|2A|G|1355
*
8UD6|1|2A|C|1376
8UD6|1|2A|G|1377
8UD6|1|2A|A|1378
8UD6|1|2A|A|1379
8UD6|1|2A|G|1380
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 27
- 50S ribosomal protein L34
- Chain 2D
- 50S ribosomal protein L2
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