IL_8UJ9_069
3D structure
- PDB id
- 8UJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human P state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.64 Å
Loop
- Sequence
- GUCU*AAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UJ9_069 not in the Motif Atlas
- Geometric match to IL_8CRE_417
- Geometric discrepancy: 0.3463
- The information below is about IL_8CRE_417
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_32983.1
- Basepair signature
- cWW-L-cWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
8UJ9|1|L5|G|1753
8UJ9|1|L5|U|1754
8UJ9|1|L5|C|1755
8UJ9|1|L5|U|1756
*
8UJ9|1|L5|A|1775
8UJ9|1|L5|A|1776
8UJ9|1|L5|C|1777
Current chains
- Chain L5
- 28S rRNA [Homo sapiens]
Nearby chains
- Chain LD
- Large ribosomal subunit protein uL18
Coloring options: