IL_8UQL_117
3D structure
- PDB id
- 8UQL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UQL_117 not in the Motif Atlas
- Homologous match to IL_5J7L_292
- Geometric discrepancy: 0.0678
- The information below is about IL_5J7L_292
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- UAA/GAN
- Motif group
- IL_89021.2
- Basepair signature
- cWW-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 6
Unit IDs
8UQL|1|a|C|1351
8UQL|1|a|U|1352
8UQL|1|a|A|1353
8UQL|1|a|A|1354
8UQL|1|a|G|1355
*
8UQL|1|a|C|1376
8UQL|1|a|G|1377
8UQL|1|a|A|1378
8UQL|1|a|U|1379
8UQL|1|a|G|1380
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain h
- 50S ribosomal protein L2
- Chain m
- 50S ribosomal protein L34
Coloring options: