IL_8URI_203
3D structure
- PDB id
- 8URI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 27 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 8URI|1|a|U|846, 8URI|1|a|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URI_203 not in the Motif Atlas
- Homologous match to IL_5J7L_399
- Geometric discrepancy: 0.1161
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8URI|1|a|A|844
8URI|1|a|A|845
8URI|1|a|U|846
8URI|1|a|U|847
8URI|1|a|C|848
*
8URI|1|a|G|930
8URI|1|a|U|931
8URI|1|a|U|932
8URI|1|a|A|933
8URI|1|a|U|934
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain f
- 50S ribosomal protein L30
Coloring options: