3D structure

PDB id
8URM (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GAAC*GGAGUGAAAAAGAAC
Length
19 nucleotides
Bulged bases
8URM|1|1|A|504, 8URM|1|1|A|508
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8URM|1|1|G|481
8URM|1|1|A|482
8URM|1|1|A|483
8URM|1|1|C|484
*
8URM|1|1|G|495
8URM|1|1|G|496
8URM|1|1|A|497
8URM|1|1|G|498
8URM|1|1|U|499
8URM|1|1|G|500
8URM|1|1|A|501
8URM|1|1|A|502
8URM|1|1|A|503
8URM|1|1|A|504
8URM|1|1|A|505
8URM|1|1|G|506
8URM|1|1|A|507
8URM|1|1|A|508
8URM|1|1|C|509

Current chains

Chain 1
13S ribosomal RNA

Nearby chains

Chain S
50S ribosomal protein L22
Chain U
50S ribosomal protein L24

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.4589 s