IL_8URM_021
3D structure
- PDB id
- 8URM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GGG*CAAUC
- Length
- 8 nucleotides
- Bulged bases
- 8URM|1|1|G|776, 8URM|1|1|A|788, 8URM|1|1|A|789, 8URM|1|1|U|790
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URM_021 not in the Motif Atlas
- Geometric match to IL_5J7L_265
- Geometric discrepancy: 0.0893
- The information below is about IL_5J7L_265
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_06549.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
8URM|1|1|G|775
8URM|1|1|G|776
8URM|1|1|G|777
*
8URM|1|1|C|787
8URM|1|1|A|788
8URM|1|1|A|789
8URM|1|1|U|790
8URM|1|1|C|791
Current chains
- Chain 1
- 13S ribosomal RNA
Nearby chains
- Chain B
- 50S ribosomal protein L2
- Chain S
- 50S ribosomal protein L22
- Chain d
- 50S ribosomal protein L34
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