IL_8URM_034
3D structure
- PDB id
- 8URM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCCCAAAG*CA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URM_034 not in the Motif Atlas
- Geometric match to IL_5J7L_278
- Geometric discrepancy: 0.082
- The information below is about IL_5J7L_278
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
8URM|1|1|U|1004
8URM|1|1|C|1005
8URM|1|1|C|1006
8URM|1|1|C|1007
8URM|1|1|A|1008
8URM|1|1|A|1009
8URM|1|1|A|1010
8URM|1|1|G|1011
*
8URM|1|1|C|1150
8URM|1|1|A|1151
Current chains
- Chain 1
- 13S ribosomal RNA
Nearby chains
- Chain J
- Large ribosomal subunit protein uL13
- Chain Q
- 50S ribosomal protein L20
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