IL_8URM_053

3D structure

PDB id

8URM (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

CUAU*AAAUG

Length

9 nucleotides

Bulged bases

8URM|1|1|U|1554

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8URM_053 not in the Motif Atlas

Geometric match to IL_5J7L_297

Geometric discrepancy: 0.1055

The information below is about IL_5J7L_297

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_99646.2

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

6

Unit IDs

8URM|1|1|C|1437
8URM|1|1|U|1438
8URM|1|1|A|1439
8URM|1|1|U|1440
*
8URM|1|1|A|1551
8URM|1|1|A|1552
8URM|1|1|A|1553
8URM|1|1|U|1554
8URM|1|1|G|1555

Current chains

Chain 1

13S ribosomal RNA

Nearby chains