IL_8URM_097
3D structure
- PDB id
- 8URM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CUC*GCGAG
- Length
- 8 nucleotides
- Bulged bases
- 8URM|1|1|G|2576, 8URM|1|1|A|2577
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8URM_097 not in the Motif Atlas
- Geometric match to IL_5J7L_340
- Geometric discrepancy: 0.0975
- The information below is about IL_5J7L_340
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
8URM|1|1|C|2510
8URM|1|1|U|2511
8URM|1|1|C|2512
*
8URM|1|1|G|2574
8URM|1|1|C|2575
8URM|1|1|G|2576
8URM|1|1|A|2577
8URM|1|1|G|2578
Current chains
- Chain 1
- 13S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain b
- 50S ribosomal protein L32
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