IL_8URY_162

3D structure

PDB id

8URY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

8URY|1|a|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8URY|1|a|G|2123
8URY|1|a|G|2124
8URY|1|a|G|2125
8URY|1|a|A|2126
8URY|1|a|G|2127
*
8URY|1|a|C|2161
8URY|1|a|G|2162
8URY|1|a|A|2163
8URY|1|a|C|2164
8URY|1|a|C|2165
8URY|1|a|U|2166
8URY|1|a|U|2167
8URY|1|a|G|2168
8URY|1|a|A|2169
8URY|1|a|A|2170
8URY|1|a|A|2171
8URY|1|a|U|2172
8URY|1|a|A|2173
8URY|1|a|C|2174
8URY|1|a|C|2175

Current chains

Chain a

23S rRNA

Nearby chains

Chain A

Transfer RNA; tRNA