3D structure

PDB id
8URY (explore in PDB, NAKB, or RNA 3D Hub)
Description
Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
3.1 Å

Loop

Sequence
CCCAGACAGC*GUCGAG
Length
16 nucleotides
Bulged bases
8URY|1|a|A|1046
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8URY|1|a|C|1043
8URY|1|a|C|1044
8URY|1|a|C|1045
8URY|1|a|A|1046
8URY|1|a|G|1047
8URY|1|a|A|1048
8URY|1|a|C|1049
8URY|1|a|A|1050
8URY|1|a|G|1051
8URY|1|a|C|1052
*
8URY|1|a|G|1107
8URY|1|a|U|1108
8URY|1|a|C|1109
8URY|1|a|G|1110
8URY|1|a|A|1111
8URY|1|a|G|1112

Current chains

Chain a
23S rRNA

Nearby chains

Chain 9
50S ribosomal protein L10
Chain p
50S ribosomal protein L6
Chain q
50S ribosomal protein L36

Coloring options:

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