IL_8UT0_011
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- GUAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 8UT0|1|2|U|170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_011 not in the Motif Atlas
- Homologous match to IL_8P9A_383
- Geometric discrepancy: 0.1818
- The information below is about IL_8P9A_383
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
8UT0|1|2|G|143
8UT0|1|2|U|144
8UT0|1|2|A|145
8UT0|1|2|U|146
8UT0|1|2|A|147
8UT0|1|2|A|148
8UT0|1|2|C|149
*
8UT0|1|2|G|165
8UT0|1|2|C|166
8UT0|1|2|U|167
8UT0|1|2|A|168
8UT0|1|2|A|169
8UT0|1|2|U|170
8UT0|1|2|A|171
8UT0|1|2|C|172
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain ST
- 40S ribosomal protein S6-A
- Chain Sd
- 40S ribosomal protein S24-A
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