3D structure

PDB id
8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.22 Å

Loop

Sequence
ACGUUU*AUCGU
Length
11 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UT0|1|2|A|817
8UT0|1|2|C|818
8UT0|1|2|G|819
8UT0|1|2|U|820
8UT0|1|2|U|821
8UT0|1|2|U|822
*
8UT0|1|2|A|850
8UT0|1|2|U|851
8UT0|1|2|C|852
8UT0|1|2|G|853
8UT0|1|2|U|854

Current chains

Chain 2
18S rRNA

Nearby chains

Chain LT
60S ribosomal protein L19-A
Chain SU
40S ribosomal protein S7-A

Coloring options:

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