IL_8UT0_042
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- UGG*CCA
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: UGG,CCA
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_042 not in the Motif Atlas
- Geometric match to IL_4V88_405
- Geometric discrepancy: 0.1962
- The information below is about IL_4V88_405
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10167.1
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 48
Unit IDs
8UT0|1|2|U|822
8UT0|1|2|G|823
8UT0|1|2|G|824
*
8UT0|1|2|C|848
8UT0|1|2|C|849
8UT0|1|2|A|850
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain LT
- 60S ribosomal protein L19-A
- Chain SX
- 40S ribosomal protein S11-A
Coloring options: