3D structure

PDB id
8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.22 Å

Loop

Sequence
UGG*CUUUGUA
Length
10 nucleotides
Bulged bases
8UT0|1|A|U|252
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UT0|1|A|U|169
8UT0|1|A|G|170
8UT0|1|A|G|171
*
8UT0|1|A|C|247
8UT0|1|A|U|248
8UT0|1|A|U|249
8UT0|1|A|U|250
8UT0|1|A|G|251
8UT0|1|A|U|252
8UT0|1|A|A|253

Current chains

Chain A
25S rRNA

Nearby chains

Chain LJ
60S ribosomal protein L8-A
Chain LN
60S ribosomal protein L13-A
Chain Lj
60S ribosomal protein L35-A

Coloring options:

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