IL_8UT0_106
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- GGAUAAAUC*GGAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 8UT0|1|A|A|519, 8UT0|1|A|U|520
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_106 not in the Motif Atlas
- Homologous match to IL_8P9A_247
- Geometric discrepancy: 0.0986
- The information below is about IL_8P9A_247
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_52712.1
- Basepair signature
- cWW-L-R-tHW-tHW-tHW-L-R-cWW
- Number of instances in this motif group
- 1
Unit IDs
8UT0|1|A|G|517
8UT0|1|A|G|518
8UT0|1|A|A|519
8UT0|1|A|U|520
8UT0|1|A|A|521
8UT0|1|A|A|522
8UT0|1|A|A|523
8UT0|1|A|U|524
8UT0|1|A|C|525
*
8UT0|1|A|G|567
8UT0|1|A|G|568
8UT0|1|A|A|569
8UT0|1|A|A|570
8UT0|1|A|U|571
8UT0|1|A|A|572
8UT0|1|A|C|573
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L4-A
- Chain LI
- 60S ribosomal protein L7-A
- Chain LO
- 60S ribosomal protein L14-A
- Chain LU
- 60S ribosomal protein L20-A
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