IL_8UT0_119
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- CUG*CG
- Length
- 5 nucleotides
- Bulged bases
- 8UT0|1|A|U|874
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_119 not in the Motif Atlas
- Homologous match to IL_8P9A_260
- Geometric discrepancy: 0.0965
- The information below is about IL_8P9A_260
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
8UT0|1|A|C|873
8UT0|1|A|U|874
8UT0|1|A|G|875
*
8UT0|1|A|C|886
8UT0|1|A|G|887
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LE
- 60S ribosomal protein L3
- Chain Ll
- 60S ribosomal protein L37-A
Coloring options: