IL_8UT0_147
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- UCAAC*GGA
- Length
- 8 nucleotides
- Bulged bases
- 8UT0|1|A|G|1514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_147 not in the Motif Atlas
- Homologous match to IL_8P9A_290
- Geometric discrepancy: 0.1188
- The information below is about IL_8P9A_290
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
8UT0|1|A|U|1501
8UT0|1|A|C|1502
8UT0|1|A|A|1503
8UT0|1|A|A|1504
8UT0|1|A|C|1505
*
8UT0|1|A|G|1513
8UT0|1|A|G|1514
8UT0|1|A|A|1515
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LR
- 60S ribosomal protein L17-A
- Chain LT
- 60S ribosomal protein L19-A
- Chain Ln
- 60S ribosomal protein L39
- Chain z
- Cytoplasmic 60S subunit biogenesis factor REH1 (N-terminal 3xFLAG tag)
Coloring options: