3D structure

PDB id
8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
Experimental method
ELECTRON MICROSCOPY
Resolution
3.22 Å

Loop

Sequence
CUGA*UGCAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8UT0|1|A|C|1563
8UT0|1|A|U|1564
8UT0|1|A|G|1565
8UT0|1|A|A|1566
*
8UT0|1|A|U|1572
8UT0|1|A|G|1573
8UT0|1|A|C|1574
8UT0|1|A|A|1575
8UT0|1|A|G|1576

Current chains

Chain A
25S rRNA

Nearby chains

Chain C
5.8S ribosomal RNA; 5.8S rRNA
Chain LZ
60S ribosomal protein L25

Coloring options:

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