IL_8UT0_200
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- CG*CAG
- Length
- 5 nucleotides
- Bulged bases
- 8UT0|1|A|A|2971
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_200 not in the Motif Atlas
- Geometric match to IL_5TBW_060
- Geometric discrepancy: 0.3183
- The information below is about IL_5TBW_060
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 127
Unit IDs
8UT0|1|A|C|2960
8UT0|1|A|G|2961
*
8UT0|1|A|C|2970
8UT0|1|A|A|2971
8UT0|1|A|G|2972
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LD
- 60S ribosomal protein L2-A
- Chain LL
- 60S ribosomal protein L10
- Chain Ls
- Translation factor eIF5A
- Chain m
- Transfer RNA; tRNA
- Chain n
- Transfer RNA; tRNA
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